MOMD:
Mouse Oral Microbiome Database
Home
Taxonomy
Genomics
Tools
16S rRNA Gene Idnetification
BLAST Search Genomes
Download
Publication
MOMD Genome Explorer
Selected genome:
Staphylococcus aureus
STF.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
Genome Viewer
PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
Quick search
:
Match all words
Match any words
Match exact phrase
Partially
In whole field
(leave empty to show all)
NCBI Genome Annotation:
contigs: 123
bases: 2,698,428 bps
CDS: 2,647
rRNA: 17
tRNA: 58
tmRNA: 1
Total number of protein coding genes annotated/found:
2,590
Display
20
50
100
All items per page
🡄
Items 41 - 60
🡆
click arrow to navigate by page or
of 130 pages
Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5004|JADGKH010000081.1
MBF0704526.1
Genome Viewer
NA
AA
1716/572
25792-27507
urease subunit alpha
SEQF5004|JADGKH010000081.1
MBF0704527.1
Genome Viewer
NA
AA
453/151
27520-27972
urease accessory protein UreE
SEQF5004|JADGKH010000081.1
MBF0704528.1
Genome Viewer
NA
AA
690/230
27965-28654
urease accessory protein UreF
SEQF5004|JADGKH010000081.1
MBF0704529.1
Genome Viewer
NA
AA
615/205
28667-29281
urease accessory protein UreG
SEQF5004|JADGKH010000081.1
MBF0704530.1
Genome Viewer
NA
AA
837/279
29281-30117
urease accessory protein UreD
SEQF5004|JADGKH010000081.1
MBF0704531.1
Genome Viewer
NA
AA
348/116
30653-30306
HTH-type transcriptional regulator SarR
SEQF5004|JADGKH010000081.1
MBF0704532.1
Genome Viewer
NA
AA
327/109
31407-31081
PH domain-containing protein
SEQF5004|JADGKH010000081.1
MBF0704533.1
Genome Viewer
NA
AA
744/248
32214-31471
transcriptional regulator
SEQF5004|JADGKH010000081.1
MBF0704534.1
Genome Viewer
NA
AA
1956/652
34196-32241
helix-turn-helix transcriptional regulator
SEQF5004|JADGKH010000081.1
MBF0704535.1
Genome Viewer
NA
AA
810/270
34806-35615
CHAP domain-containing protein
SEQF5004|JADGKH010000081.1
MBF0704536.1
Genome Viewer
NA
AA
1401/467
37448-36048
Na+/H+ antiporter NhaC
SEQF5004|JADGKH010000081.1
MBF0704537.1
Genome Viewer
NA
AA
1083/361
38625-37543
NAD/NADP octopine/nopaline dehydrogenase family protein
SEQF5004|JADGKH010000081.1
MBF0704538.1
Genome Viewer
NA
AA
423/141
38873-39295
DUF4870 domain-containing protein
SEQF5004|JADGKH010000081.1
MBF0704539.1
Genome Viewer
NA
AA
510/170
39532-40041
CHAP domain-containing protein
SEQF5004|JADGKH010000081.1
MBF0704540.1
Genome Viewer
NA
AA
954/318
40403-41356
2-hydroxyacid dehydrogenase family protein
SEQF5004|JADGKH010000081.1
MBF0704541.1
Genome Viewer
NA
AA
1125/375
42561-41437
FAD-dependent monooxygenase
SEQF5004|JADGKH010000081.1
MBF0704542.1
Genome Viewer
NA
AA
777/259
43648-42872
N-acetylglucosaminidase
SEQF5004|JADGKH010000081.1
MBF0704543.1
Genome Viewer
NA
AA
234/78
43903-43670
hypothetical protein
SEQF5004|JADGKH010000081.1
MBF0704544.1
Genome Viewer
NA
AA
474/158
44604-44131
DUF1641 domain-containing protein
SEQF5004|JADGKH010000081.1
MBF0704545.1
Genome Viewer
NA
AA
2955/985
47558-44604
formate dehydrogenase subunit alpha
🡄
Items 41 - 60
🡆
click arrow to navigate by page or
of 130 pages
Genome Viewer
JBrowse Genome Viewer
* Click GI,UID,Gene Product to go to NCBI record
^ Click column names to toggle sorting
Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
Powered by
